%%%%%%%%;
% This file lists the gene- and perturbagen-indices of;
% /data/rangan/dir_bcc/dir_CMAP/dir_reframe/filtered_modzs_signatures_24h_trtcp_A549_1uM.h5 ;
% in their order of importance, ;
% with the most important indices listed first (i.e., higher) in the file. ;
%%%%%%%%;
% First we list 221 of the gene-indices. ;
% These range from 0 up to 10173 (i.e., they are zero-based). ;
% A line reading 'ng -1' refers to the ng-th bestinferred-gene, ;
% as listed in the file ;
% /data/rangan/dir_bcc/dir_CMAP/lincs_20864_genes.txt ;
%%%%%%%%;
% In this file we only list the 180 perturbagens that are POSITIVELY correlated with the sub-signature. ;
% These range from 0 up to 12781 (i.e., they are zero-based). ;
% A line reading '-1 np' refers to the np-th perturbagen, ;
% as listed in the file ;
% /data/rangan/dir_bcc/dir_CMAP/dir_reframe/filtered_modzs_signatures_24h_trtcp_A549_1uM.h5 ;
%%%%%%%%;
548 -1
10135 -1
8366 -1
7013 -1
4241 -1
2007 -1
443 -1
1843 -1
3175 -1
3302 -1
3477 -1
5405 -1
6259 -1
6486 -1
6883 -1
9696 -1
5604 -1
7255 -1
5812 -1
8455 -1
4752 -1
5659 -1
7130 -1
1357 -1
2306 -1
4180 -1
1824 -1
3190 -1
362 -1
4947 -1
4037 -1
1489 -1
7706 -1
4853 -1
557 -1
4772 -1
9809 -1
7586 -1
3288 -1
5103 -1
9711 -1
9697 -1
182 -1
6496 -1
3209 -1
2068 -1
5329 -1
2682 -1
9517 -1
6070 -1
5023 -1
9821 -1
7860 -1
1736 -1
9418 -1
9936 -1
9935 -1
5360 -1
8704 -1
8631 -1
7424 -1
8407 -1
3886 -1
1420 -1
8769 -1
8369 -1
1360 -1
8102 -1
1776 -1
4482 -1
2134 -1
1600 -1
2458 -1
8514 -1
5530 -1
5370 -1
528 -1
686 -1
845 -1
8554 -1
4567 -1
5463 -1
9420 -1
7523 -1
589 -1
6577 -1
3705 -1
4011 -1
9169 -1
5111 -1
6969 -1
6147 -1
6600 -1
9576 -1
700 -1
6541 -1
2548 -1
5642 -1
4865 -1
5222 -1
4283 -1
9259 -1
811 -1
3644 -1
2496 -1
439 -1
4038 -1
9927 -1
5974 -1
8775 -1
6753 -1
6149 -1
5303 -1
8414 -1
4763 -1
1575 -1
2211 -1
8127 -1
3652 -1
7525 -1
4406 -1
8334 -1
3245 -1
551 -1
5989 -1
7173 -1
673 -1
8975 -1
8413 -1
2025 -1
7433 -1
3852 -1
6482 -1
1025 -1
1468 -1
7758 -1
7759 -1
4443 -1
8144 -1
6148 -1
8260 -1
1948 -1
3280 -1
1205 -1
6951 -1
878 -1
7766 -1
5665 -1
9150 -1
6215 -1
1438 -1
4424 -1
3844 -1
5731 -1
2966 -1
5673 -1
7969 -1
5620 -1
746 -1
3164 -1
1537 -1
7107 -1
8340 -1
9965 -1
6306 -1
7868 -1
8249 -1
2987 -1
5048 -1
9623 -1
9691 -1
4564 -1
1630 -1
7644 -1
1023 -1
3437 -1
1311 -1
1347 -1
3693 -1
5436 -1
2865 -1
2734 -1
4614 -1
2099 -1
9706 -1
6690 -1
4498 -1
4985 -1
3228 -1
4348 -1
2859 -1
9562 -1
3111 -1
2840 -1
9806 -1
6425 -1
2562 -1
6559 -1
6552 -1
9627 -1
495 -1
3394 -1
1663 -1
8673 -1
4997 -1
8187 -1
9188 -1
9657 -1
4651 -1
6039 -1
6080 -1
4107 -1
8665 -1
8345 -1
1781 -1
1078 -1
1106 -1
5580 -1
6999 -1
9520 -1
5761 -1
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