%%%%%%%%;
% This file lists the gene- and perturbagen-indices of;
% /data/rangan/dir_bcc/dir_CMAP/dir_reframe/filtered_modzs_signatures_24h_trtcp_BICR6_5uM.h5 ;
% in their order of importance, ;
% with the most important indices listed first (i.e., higher) in the file. ;
%%%%%%%%;
% First we list 5 of the gene-indices. ;
% These range from 0 up to 977 (i.e., they are zero-based). ;
% A line reading 'ng -1' refers to the ng-th landmark-gene, ;
% as listed in the file ;
% /data/rangan/dir_bcc/dir_CMAP/dir_reframe/clue_landmark_genes_20250822_tsv.txt ;
%%%%%%%%;
% In this file we only list the 0 perturbagens that are POSITIVELY correlated with the sub-signature. ;
% These range from 0 up to 12670 (i.e., they are zero-based). ;
% A line reading '-1 np' refers to the np-th perturbagen, ;
% as listed in the file ;
% /data/rangan/dir_bcc/dir_CMAP/dir_reframe/filtered_modzs_signatures_24h_trtcp_BICR6_5uM.h5 ;
%%%%%%%%;
94 -1
975 -1
742 -1
536 -1
454 -1