%%%%%%%%;
% This file lists the gene- and perturbagen-indices of;
% /data/rangan/dir_bcc/dir_CMAP/dir_reframe/filtered_modzs_signatures_24h_trtcp_A549_5uM.h5 ;
% in their order of importance, ;
% with the most important indices listed first (i.e., higher) in the file. ;
%%%%%%%%;
% First we list 236 of the gene-indices. ;
% These range from 0 up to 977 (i.e., they are zero-based). ;
% A line reading 'ng -1' refers to the ng-th landmark-gene, ;
% as listed in the file ;
% /data/rangan/dir_bcc/dir_CMAP/dir_reframe/clue_landmark_genes_20250822_tsv.txt ;
%%%%%%%%;
% In this file we only list the 638 perturbagens that are NEGATIVELY correlated with the sub-signature. ;
% These range from 0 up to 12351 (i.e., they are zero-based). ;
% A line reading '-1 np' refers to the np-th perturbagen, ;
% as listed in the file ;
% /data/rangan/dir_bcc/dir_CMAP/dir_reframe/filtered_modzs_signatures_24h_trtcp_A549_5uM.h5 ;
%%%%%%%%;
206 -1
791 -1
397 -1
272 -1
231 -1
112 -1
276 -1
281 -1
339 -1
435 -1
445 -1
449 -1
468 -1
530 -1
765 -1
795 -1
806 -1
831 -1
930 -1
133 -1
282 -1
235 -1
865 -1
634 -1
524 -1
764 -1
61 -1
737 -1
718 -1
592 -1
92 -1
316 -1
619 -1
881 -1
301 -1
781 -1
405 -1
962 -1
706 -1
491 -1
790 -1
343 -1
287 -1
808 -1
749 -1
837 -1
147 -1
113 -1
502 -1
454 -1
102 -1
490 -1
154 -1
770 -1
739 -1
639 -1
915 -1
672 -1
463 -1
223 -1
674 -1
747 -1
91 -1
219 -1
381 -1
328 -1
883 -1
549 -1
408 -1
609 -1
26 -1
559 -1
902 -1
336 -1
148 -1
267 -1
128 -1
255 -1
740 -1
584 -1
285 -1
234 -1
746 -1
787 -1
817 -1
651 -1
143 -1
376 -1
624 -1
683 -1
713 -1
895 -1
596 -1
484 -1
359 -1
724 -1
859 -1
177 -1
162 -1
197 -1
807 -1
358 -1
333 -1
66 -1
379 -1
157 -1
525 -1
872 -1
836 -1
217 -1
794 -1
203 -1
812 -1
725 -1
772 -1
923 -1
306 -1
465 -1
168 -1
631 -1
72 -1
362 -1
932 -1
562 -1
818 -1
416 -1
574 -1
921 -1
341 -1
901 -1
386 -1
514 -1
846 -1
469 -1
254 -1
742 -1
142 -1
536 -1
664 -1
288 -1
855 -1
45 -1
243 -1
548 -1
908 -1
759 -1
98 -1
702 -1
528 -1
743 -1
171 -1
647 -1
100 -1
495 -1
246 -1
29 -1
722 -1
510 -1
797 -1
717 -1
335 -1
473 -1
248 -1
867 -1
612 -1
675 -1
714 -1
93 -1
972 -1
943 -1
827 -1
352 -1
541 -1
185 -1
216 -1
244 -1
726 -1
635 -1
526 -1
317 -1
110 -1
756 -1
844 -1
931 -1
127 -1
763 -1
117 -1
130 -1
350 -1
327 -1
404 -1
778 -1
19 -1
521 -1
504 -1
958 -1
261 -1
783 -1
354 -1
871 -1
292 -1
671 -1
845 -1
601 -1
68 -1
589 -1
497 -1
299 -1
654 -1
754 -1
924 -1
32 -1
172 -1
79 -1
400 -1
207 -1
322 -1
632 -1
954 -1
107 -1
298 -1
555 -1
784 -1
570 -1
392 -1
975 -1
192 -1
658 -1
81 -1
145 -1
10 -1
167 -1
253 -1
874 -1
163 -1
440 -1
-1 8307
-1 1498
-1 1886
-1 39
-1 5825
-1 1352
-1 173
-1 10855
-1 2757
-1 9399
-1 805
-1 9455
-1 2402
-1 200
-1 1410
-1 10013
-1 4851
-1 4582
-1 9515
-1 2244
-1 10616
-1 192
-1 10676
-1 2173
-1 1488
-1 1334
-1 2044
-1 9533
-1 706
-1 4887
-1 1962
-1 4562
-1 1546
-1 7600
-1 1875
-1 4868
-1 217
-1 189
-1 3700
-1 164
-1 2158
-1 25
-1 2396
-1 1876
-1 9534
-1 9475
-1 1906
-1 172
-1 4808
-1 2482
-1 9520
-1 2414
-1 24
-1 1277
-1 1944
-1 9438
-1 9593
-1 289
-1 3
-1 50
-1 223
-1 630
-1 688
-1 150
-1 1990
-1 1926
-1 2380
-1 628
-1 133
-1 11272
-1 1952
-1 1575
-1 161
-1 42
-1 1189
-1 5859
-1 1738
-1 10654
-1 9413
-1 2174
-1 11088
-1 11046
-1 9452
-1 111
-1 9410
-1 1915
-1 69
-1 5610
-1 18
-1 9242
-1 1740
-1 11069
-1 28
-1 9646
-1 830
-1 11047
-1 1800
-1 61
-1 4728
-1 3506
-1 17
-1 1909
-1 9509
-1 1890
-1 2116
-1 1430
-1 1922
-1 827
-1 4824
-1 9490
-1 1637
-1 9383
-1 6538
-1 9476
-1 1414
-1 1934
-1 1912
-1 49
-1 162
-1 1930
-1 11070
-1 1898
-1 168
-1 1565
-1 12344
-1 1528
-1 9535
-1 58
-1 1927
-1 282
-1 54
-1 1913
-1 9540
-1 2597
-1 159
-1 9580
-1 626
-1 1423
-1 2129
-1 70
-1 2059
-1 9477
-1 1882
-1 1300
-1 1877
-1 83
-1 1881
-1 1318
-1 1275
-1 66
-1 52
-1 23
-1 5344
-1 645
-1 1918
-1 1425
-1 2176
-1 10994
-1 1408
-1 6915
-1 684
-1 31
-1 56
-1 9532
-1 1616
-1 5258
-1 166
-1 444
-1 10551
-1 57
-1 1983
-1 208
-1 9436
-1 9574
-1 148
-1 8
-1 9511
-1 9456
-1 1932
-1 1902
-1 1545
-1 1675
-1 134
-1 1335
-1 76
-1 1984
-1 10179
-1 5398
-1 2005
-1 88
-1 259
-1 5360
-1 1884
-1 155
-1 1332
-1 9364
-1 75
-1 2177
-1 1896
-1 67
-1 5630
-1 1895
-1 10376
-1 193
-1 137
-1 47
-1 11935
-1 1916
-1 147
-1 1949
-1 9512
-1 9527
-1 8226
-1 6200
-1 1417
-1 807
-1 9374
-1 2166
-1 1466
-1 1432
-1 231
-1 1256
-1 5755
-1 1925
-1 1357
-1 1407
-1 1893
-1 5139
-1 866
-1 1354
-1 5854
-1 9348
-1 9975
-1 120
-1 1900
-1 171
-1 1961
-1 5832
-1 1986
-1 2
-1 1279
-1 2134
-1 6932
-1 1979
-1 2026
-1 1551
-1 2178
-1 6477
-1 1390
-1 9570
-1 1404
-1 9352
-1 1372
-1 5956
-1 649
-1 1336
-1 1888
-1 1920
-1 9536
-1 21
-1 1485
-1 5889
-1 129
-1 9394
-1 1987
-1 4
-1 10230
-1 1360
-1 9405
-1 272
-1 669
-1 672
-1 1281
-1 238
-1 2135
-1 1465
-1 9650
-1 1207
-1 5631
-1 5627
-1 1939
-1 19
-1 1267
-1 1259
-1 100
-1 9559
-1 1947
-1 9474
-1 9517
-1 8263
-1 10374
-1 10998
-1 1391
-1 2142
-1 5085
-1 116
-1 5765
-1 1260
-1 5056
-1 1280
-1 9423
-1 1353
-1 1955
-1 2170
-1 5163
-1 1272
-1 1398
-1 803
-1 5680
-1 270
-1 219
-1 146
-1 174
-1 9397
-1 785
-1 5706
-1 6225
-1 1960
-1 5075
-1 1929
-1 1442
-1 804
-1 10352
-1 1492
-1 2160
-1 22
-1 152
-1 3697
-1 1512
-1 106
-1 130
-1 9531
-1 2136
-1 1968
-1 2003
-1 694
-1 1549
-1 2181
-1 9496
-1 6928
-1 1257
-1 9506
-1 1908
-1 9623
-1 1405
-1 784
-1 707
-1 9659
-1 1966
-1 1393
-1 657
-1 5178
-1 9391
-1 72
-1 215
-1 2161
-1 1903
-1 6224
-1 2047
-1 1282
-1 29
-1 1530
-1 5279
-1 1507
-1 269
-1 5909
-1 5358
-1 1945
-1 1265
-1 9376
-1 9656
-1 5242
-1 5152
-1 89
-1 1254
-1 9654
-1 5595
-1 704
-1 850
-1 5167
-1 9387
-1 819
-1 170
-1 2128
-1 4299
-1 1910
-1 9393
-1 254
-1 10060
-1 872
-1 5125
-1 3533
-1 9398
-1 2175
-1 9363
-1 6382
-1 5601
-1 9558
-1 1298
-1 11305
-1 9365
-1 1431
-1 815
-1 102
-1 5015
-1 5160
-1 1481
-1 661
-1 1253
-1 5583
-1 1342
-1 846
-1 843
-1 1386
-1 1473
-1 5260
-1 96
-1 9362
-1 33
-1 9463
-1 762
-1 5766
-1 877
-1 1283
-1 5037
-1 9622
-1 1313
-1 889
-1 230
-1 647
-1 9575
-1 2069
-1 5937
-1 228
-1 71
-1 5800
-1 1296
-1 9579
-1 1964
-1 10539
-1 5608
-1 2040
-1 9434
-1 686
-1 1959
-1 5761
-1 5593
-1 703
-1 1446
-1 9402
-1 5395
-1 6108
-1 9554
-1 1374
-1 5104
-1 1348
-1 10269
-1 5276
-1 1550
-1 2137
-1 121
-1 1531
-1 7908
-1 265
-1 643
-1 131
-1 9353
-1 1284
-1 251
-1 5179
-1 667
-1 5164
-1 5278
-1 663
-1 1965
-1 5
-1 9358
-1 10333
-1 5838
-1 1899
-1 818
-1 9424
-1 15
-1 1919
-1 1293
-1 1251
-1 1368
-1 5793
-1 5883
-1 1303
-1 1266
-1 11026
-1 1542
-1 6220
-1 1873
-1 1320
-1 93
-1 1263
-1 849
-1 1389
-1 5364
-1 8007
-1 1274
-1 5607
-1 6940
-1 1445
-1 11265
-1 1928
-1 9640
-1 3604
-1 683
-1 9381
-1 1548
-1 1176
-1 7025
-1 1887
-1 5322
-1 5934
-1 203
-1 904
-1 7946
-1 851
-1 1967
-1 51
-1 10580
-1 232
-1 724
-1 9428
-1 1317
-1 908
-1 5604
-1 10581
-1 716
-1 5667
-1 2132
-1 5172
-1 9491
-1 8086
-1 923
-1 5905
-1 9361
-1 11324
-1 1879
-1 10958
-1 1907
-1 10299
-1 9596
-1 9485
-1 9419
-1 795
-1 633
-1 9382
-1 9404
-1 7854
-1 127
-1 9379
-1 2121
-1 1262
-1 5554
-1 5662
-1 2153
-1 5629
-1 7198
-1 1458
-1 6203
-1 2021
-1 2064
-1 7802
-1 9614
-1 5202
-1 736
-1 10301
-1 113
-1 9586
-1 9389
-1 5217
-1 897
-1 1975
-1 5190
-1 2024
-1 9601
-1 5508
-1 5571
-1 5005
-1 782
-1 9400
-1 933
-1 5777
-1 6230
-1 5262
-1 5612
-1 824
-1 163
-1 650
-1 9375
-1 5130
-1 5936
-1 8030
-1 5076
-1 1977
-1 5240
-1 5653
-1 6092
-1 5634
-1 5014
-1 5261
-1 5775
-1 5110
-1 1733
-1 816
-1 1490
-1 1443
-1 1347
-1 430
-1 631
-1 6918
-1 9578
-1 9488
-1 6227
-1 5343
-1 1338
-1 11285
-1 5162
-1 11222
-1 5365
-1 764
-1 768
-1 10538
-1 273
-1 9528
-1 10458
-1 674
-1 5063
-1 5204
-1 7820
-1 5841
-1 10462
-1 5651